miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|261464874|gb|GT163399.1|GT163399 GGGGACCCATCACTCAAACCAAAACACATTTCATCATACTATACTCTTTACTATAATATTATCCTCTCTATTTTCATTAT
CATTAACAATATGGAAATGGTTAGCAAAATTGCATGCTTTGTTCTTTTGTGCATGGTAGTGGTTGCACCCCATGCAGAGG
CATTAACTTGTGGTCAAGTTACTGCTGGCTTGGCTCCTTGCCTCCCTTATCTTCAAGGCCGTGGCCCTCTAGGAGGCTGT
TGTGGTGGTGTTAAGAATCTGTTGGGTTCAGCCAAGACTACCGCGGATCGAAAGACGGCATGCACTTGCTTGAAATCAGC
TGCTAATGCTATAAAGGGAATTGATTTGAACAAAGCTGCTGGTATTCCTAGTGTTTGTAAAGTTAACATTCCTTACAAGA
TCAGCCCCTCCACTGACTGCTCCACGGTTCAGTAAAGTTGATCATCAAAATATGGAACCATTTGAGGAGAAGTTATAAGA
ATAAAATGAATGGAGTGTGATCCTGCTTATGGATCCATTAGTTAATATGTTGTGTTTGTTGTCTTTTTGTTTCTTTTTTC
GTTTTGTC




Most similar to sp|P27056|NLTP1_SOLLC

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P27056|NLTP1_SOLLC Non-specific lipid-transfer protein 1
           OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1
          Length = 114

 Score =  205 bits (521), Expect = 2e-52
 Identities = 103/114 (90%), Positives = 103/114 (90%)
 Frame = +1

Query: 91  MEMVSKIACFVLLCMVVVAPHAEALTCGQVTAGLAPCLPYLQXXXXXXXXXXXVKNLLGS 270
           MEMVSKIACFVLLCMVVVAPHAEALTCGQVTAGLAPCLPYLQ           VKNLLGS
Sbjct: 1   MEMVSKIACFVLLCMVVVAPHAEALTCGQVTAGLAPCLPYLQGRGPLGGCCGGVKNLLGS 60

Query: 271 AKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 432
           AKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ
Sbjct: 61  AKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114